Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ChkaO54804 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.25□□□□□ -0.29
ChkaO54804 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ChkaO54804 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ChkaO54804 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ChkaO54804 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ChkaO54804 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ChkaO54804 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ChkaO54804 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.25□□□□□ -0.29
ChkaO54804 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
ChkaO54804 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ChkaO54804 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.24□□□□□ -0.29
ChkaO54804 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.24□□□□□ -0.29
ChkaO54804 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
ChkaO54804 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ChkaO54804 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ChkaO54804 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.24□□□□□ -0.29
ChkaO54804 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
ChkaO54804 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.24□□□□□ -0.29
ChkaO54804 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
ChkaO54804 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ChkaO54804 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ChkaO54804 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.23□□□□□ -0.29
ChkaO54804 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.23□□□□□ -0.29
ChkaO54804 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Gm12341-201ENSMUST00000119724 503 ntBASIC13.23□□□□□ -0.29
ChkaO54804 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ChkaO54804 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.23□□□□□ -0.29
ChkaO54804 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ChkaO54804 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ChkaO54804 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ChkaO54804 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ChkaO54804 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ChkaO54804 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.22□□□□□ -0.29
ChkaO54804 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ChkaO54804 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ChkaO54804 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ChkaO54804 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ChkaO54804 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.22□□□□□ -0.29
ChkaO54804 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.22□□□□□ -0.29
ChkaO54804 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.22□□□□□ -0.29
ChkaO54804 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ChkaO54804 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ChkaO54804 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ChkaO54804 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ChkaO54804 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms