Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ebf3O08791 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.63□□□□□ -0.23
Ebf3O08791 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ebf3O08791 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ebf3O08791 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.63□□□□□ -0.23
Ebf3O08791 Gm13342-201ENSMUST00000121055 207 ntBASIC13.63□□□□□ -0.23
Ebf3O08791 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.63□□□□□ -0.23
Ebf3O08791 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.63□□□□□ -0.23
Ebf3O08791 Gm38241-201ENSMUST00000192641 898 ntBASIC13.63□□□□□ -0.23
Ebf3O08791 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.63□□□□□ -0.23
Ebf3O08791 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.63□□□□□ -0.23
Ebf3O08791 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ebf3O08791 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Ebf3O08791 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ebf3O08791 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ebf3O08791 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ebf3O08791 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Ebf3O08791 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ebf3O08791 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.62□□□□□ -0.23
Ebf3O08791 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Gm11793-201ENSMUST00000120433 981 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Gm13123-201ENSMUST00000122173 492 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.62□□□□□ -0.23
Ebf3O08791 Gm25261-201ENSMUST00000157416 134 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.62□□□□□ -0.23
Ebf3O08791 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Gm7783-201ENSMUST00000204795 781 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Gm18935-201ENSMUST00000212692 664 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.62□□□□□ -0.23
Ebf3O08791 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ebf3O08791 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ebf3O08791 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ebf3O08791 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf3O08791 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ebf3O08791 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ebf3O08791 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Ebf3O08791 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.61□□□□□ -0.23
Ebf3O08791 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.61□□□□□ -0.23
Ebf3O08791 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms