Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube3aO08759 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ube3aO08759 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube3aO08759 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube3aO08759 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube3aO08759 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3aO08759 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube3aO08759 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube3aO08759 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube3aO08759 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Gm27321-201ENSMUST00000185021 205 ntBASIC14.17□□□□□ -0.14
Ube3aO08759 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Ube3aO08759 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Gm43703-201ENSMUST00000200523 763 ntBASIC14.17□□□□□ -0.14
Ube3aO08759 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ube3aO08759 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ube3aO08759 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube3aO08759 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.17□□□□□ -0.14
Ube3aO08759 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3aO08759 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.17□□□□□ -0.14
Ube3aO08759 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ube3aO08759 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ube3aO08759 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube3aO08759 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube3aO08759 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Gm27306-201ENSMUST00000183970 107 ntBASIC14.16□□□□□ -0.14
Ube3aO08759 Gm17837-201ENSMUST00000186435 985 ntBASIC14.16□□□□□ -0.14
Ube3aO08759 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ube3aO08759 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.16□□□□□ -0.14
Ube3aO08759 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.16□□□□□ -0.14
Ube3aO08759 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.16□□□□□ -0.14
Ube3aO08759 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.16□□□□□ -0.14
Ube3aO08759 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3aO08759 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.16□□□□□ -0.14
Ube3aO08759 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3aO08759 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube3aO08759 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ube3aO08759 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.15□□□□□ -0.14
Ube3aO08759 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube3aO08759 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube3aO08759 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube3aO08759 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.15□□□□□ -0.14
Ube3aO08759 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube3aO08759 Gm13453-201ENSMUST00000118708 357 ntBASIC14.15□□□□□ -0.14
Ube3aO08759 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3aO08759 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms