Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp6G5E8P0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp6G5E8P0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp6G5E8P0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC17.8■□□□□ 0.44
Tubgcp6G5E8P0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC17.8■□□□□ 0.44
Tubgcp6G5E8P0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp6G5E8P0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm14058-201ENSMUST00000116082 735 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 CT009713.8-201ENSMUST00000225448 560 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm2673-201ENSMUST00000120958 1608 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp6G5E8P0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp6G5E8P0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Gm12899-201ENSMUST00000120565 551 ntBASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Gm20392-201ENSMUST00000173047 701 ntBASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Gm21027-201ENSMUST00000219300 1236 ntBASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp6G5E8P0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp6G5E8P0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Tubgcp6G5E8P0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp6G5E8P0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp6G5E8P0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp6G5E8P0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp6G5E8P0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm29615-201ENSMUST00000185371 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28224-201ENSMUST00000186078 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm29001-201ENSMUST00000186177 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28292-201ENSMUST00000186593 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28101-201ENSMUST00000187608 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm29076-201ENSMUST00000187689 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28302-201ENSMUST00000187931 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28646-201ENSMUST00000188220 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28205-201ENSMUST00000189177 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm29032-201ENSMUST00000189797 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm28695-201ENSMUST00000190300 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Gm37448-201ENSMUST00000192795 697 ntBASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp6G5E8P0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms