Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh11xF6ZNL5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Gm7287-201ENSMUST00000205267 602 ntBASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Gm16372-201ENSMUST00000073088 450 ntBASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh11xF6ZNL5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Gm28693-202ENSMUST00000190758 331 ntBASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh11xF6ZNL5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh11xF6ZNL5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh11xF6ZNL5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Gm11814-201ENSMUST00000119515 929 ntBASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Mir7085-201ENSMUST00000184353 66 ntBASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Gm6458-201ENSMUST00000211573 635 ntBASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh11xF6ZNL5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms