Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clca3bE9PUL3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clca3bE9PUL3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clca3bE9PUL3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clca3bE9PUL3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clca3bE9PUL3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm19184-201ENSMUST00000196798 928 ntBASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm10478-201ENSMUST00000084451 396 ntBASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clca3bE9PUL3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Gm14704-201ENSMUST00000120300 874 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Gm17420-201ENSMUST00000164753 153 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Gm37008-201ENSMUST00000195712 319 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clca3bE9PUL3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Gm42693-201ENSMUST00000196779 631 ntBASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms