Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Gm7851-201ENSMUST00000117574 323 ntBASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Hfm1D3Z4R1 Gm12029-201ENSMUST00000120073 832 ntBASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Gm5863-201ENSMUST00000121760 1008 ntBASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Gm43962-201ENSMUST00000203898 190 ntBASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hfm1D3Z4R1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Gm5989-201ENSMUST00000096092 2077 ntBASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Gm15703-201ENSMUST00000120250 880 ntBASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Gm18038-201ENSMUST00000197900 485 ntBASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Gm21811-201ENSMUST00000096485 930 ntBASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hfm1D3Z4R1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms