Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Gm17391-201ENSMUST00000171036 126 ntBASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Gm15131-201ENSMUST00000119124 595 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Rmrp-201ENSMUST00000157463 271 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Gm43916-201ENSMUST00000205062 967 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a6B1AVK5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Gm17827-201ENSMUST00000211825 742 ntBASIC13.17□□□□□ -0.3
Col4a6B1AVK5 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.17□□□□□ -0.3
Col4a6B1AVK5 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms