Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm15371-201ENSMUST00000117057 784 ntBASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm18624-201ENSMUST00000220966 658 ntBASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.52□□□□□ -0.88
Trav9n-2A0A0G2JDP3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.52□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms