Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl40Q9Z2Q5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm13226-201ENSMUST00000117838 404 ntBASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm8584-201ENSMUST00000171982 758 ntBASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm42550-201ENSMUST00000201553 960 ntBASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Pck2-205ENSMUST00000226352 2784 ntBASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl40Q9Z2Q5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm45784-201ENSMUST00000188360 142 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm44397-201ENSMUST00000195950 113 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Gm7561-201ENSMUST00000211203 886 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl40Q9Z2Q5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mrpl40Q9Z2Q5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Mrpl40Q9Z2Q5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Mrpl40Q9Z2Q5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mrpl40Q9Z2Q5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Mrpl40Q9Z2Q5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl40Q9Z2Q5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms