Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn9Q9Z0S7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm6152-201ENSMUST00000151704 340 ntBASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms