Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm15429-201ENSMUST00000151268 798 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm6983-201ENSMUST00000214912 628 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm6180-201ENSMUST00000065243 498 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClcnkaQ9WUB7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms