Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Gm18187-201ENSMUST00000196476 984 ntBASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3aQ9JKX8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Gm7029-201ENSMUST00000173226 450 ntBASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.6□□□□□ -0.39
Upk3aQ9JKX8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms