Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trem1Q9JKE2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trem1Q9JKE2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.71□□□□□ -0.53
Trem1Q9JKE2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms