Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Gm33320-201ENSMUST00000192232 530 ntBASIC12.03□□□□□ -0.48
ClpxQ9JHS4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Gm6916-202ENSMUST00000205523 195 ntBASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Gm7775-201ENSMUST00000218871 853 ntBASIC12.03□□□□□ -0.48
ClpxQ9JHS4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ClpxQ9JHS4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpxQ9JHS4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm27321-201ENSMUST00000185021 205 ntBASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpxQ9JHS4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Gm12428-201ENSMUST00000119844 727 ntBASIC12.01□□□□□ -0.49
ClpxQ9JHS4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms