Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube3bQ9ES34 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gm8099-201ENSMUST00000200510 742 ntBASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gm45331-201ENSMUST00000209868 554 ntBASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.57■□□□□ 0.08
Ube3bQ9ES34 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.57■□□□□ 0.08
Ube3bQ9ES34 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube3bQ9ES34 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ube3bQ9ES34 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm11793-201ENSMUST00000120433 981 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm37319-201ENSMUST00000193500 636 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm38158-201ENSMUST00000194617 339 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm42627-201ENSMUST00000197347 224 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Gm18515-201ENSMUST00000219755 797 ntBASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube3bQ9ES34 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms