Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx2-4Q9EQM3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Nkx2-4Q9EQM3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Gm37201-201ENSMUST00000191845 523 ntBASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-4Q9EQM3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Gm5070-201ENSMUST00000177599 862 ntBASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-4Q9EQM3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm11667-201ENSMUST00000119828 486 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms