Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp8Q9DB85 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rrp8Q9DB85 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rrp8Q9DB85 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rrp8Q9DB85 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rrp8Q9DB85 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Gm5904-201ENSMUST00000210286 865 ntBASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp8Q9DB85 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm13316-201ENSMUST00000140537 691 ntBASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm3786-201ENSMUST00000202659 378 ntBASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Rps4l-202ENSMUST00000204242 789 ntBASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp8Q9DB85 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms