Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm8598-201ENSMUST00000221184 836 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2aQ9DB34 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm8810-201ENSMUST00000172895 754 ntBASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Proscos-202ENSMUST00000178990 666 ntBASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2aQ9DB34 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2aQ9DB34 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms