Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Upk3bl1Q9D701 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Daam2-202ENSMUST00000224595 1926 ntBASIC11.98□□□□□ -0.49
Upk3bl1Q9D701 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Gm18733-201ENSMUST00000173950 856 ntBASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Gm27631-201ENSMUST00000184163 466 ntBASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Gm38170-201ENSMUST00000195404 816 ntBASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Gm9520-201ENSMUST00000209460 1253 ntBASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk3bl1Q9D701 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms