Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.14□□□□□ -0.47
Trim13Q9CYB0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Gm6912-201ENSMUST00000117218 544 ntBASIC12.14□□□□□ -0.47
Trim13Q9CYB0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim13Q9CYB0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm24158-201ENSMUST00000175263 71 ntBASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm10766-202ENSMUST00000194123 606 ntBASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm43474-201ENSMUST00000196415 774 ntBASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm9229-201ENSMUST00000222777 126 ntBASIC12.13□□□□□ -0.47
Trim13Q9CYB0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim13Q9CYB0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gm15393-201ENSMUST00000120499 219 ntBASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.12□□□□□ -0.47
Trim13Q9CYB0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Gm5425-201ENSMUST00000214125 459 ntBASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Shd-206ENSMUST00000225145 998 ntBASIC12.12□□□□□ -0.47
Trim13Q9CYB0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.12□□□□□ -0.47
Trim13Q9CYB0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms