Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm18041-201ENSMUST00000218210 618 ntBASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.31□□□□□ -0.12
Ssr1Q9CY50 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.3□□□□□ -0.12
Ssr1Q9CY50 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Mir6956-201ENSMUST00000183598 62 ntBASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssr1Q9CY50 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.3□□□□□ -0.12
Ssr1Q9CY50 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 AC107453.4-201ENSMUST00000227068 1817 ntBASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.29□□□□□ -0.12
Ssr1Q9CY50 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms