Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm26308-201ENSMUST00000157768 69 ntBASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm24158-201ENSMUST00000175263 71 ntBASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm17330-201ENSMUST00000221047 165 ntBASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Krt88Q9CPR6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Shd-206ENSMUST00000225145 998 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms