Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Mir5132-201ENSMUST00000175166 71 ntBASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Gm2546-201ENSMUST00000182630 991 ntBASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim34aQ99PP6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Mir874-201ENSMUST00000104769 76 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm11531-201ENSMUST00000117614 555 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm13492-201ENSMUST00000119772 665 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim34aQ99PP6 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms