Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm4875-201ENSMUST00000118257 786 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm13223-201ENSMUST00000118609 747 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm17837-201ENSMUST00000186435 985 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim8Q99PJ2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Gm27680-201ENSMUST00000184192 160 ntBASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Mir7023-201ENSMUST00000185093 64 ntBASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms