Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh15Q99PJ1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh15Q99PJ1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Gm4157-201ENSMUST00000211647 679 ntBASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Gm8325-201ENSMUST00000099086 453 ntBASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Mir7677-201ENSMUST00000184226 67 ntBASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Gm10288-201ENSMUST00000084614 537 ntBASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh15Q99PJ1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm4726-201ENSMUST00000135604 736 ntBASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm6019-201ENSMUST00000148369 736 ntBASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm44958-201ENSMUST00000203734 736 ntBASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh15Q99PJ1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdh15Q99PJ1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms