Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm12151-201ENSMUST00000121374 290 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm24694-201ENSMUST00000180054 110 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Mir8102-201ENSMUST00000184148 139 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm27663-201ENSMUST00000184839 110 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdk5rap3Q99LM2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Gm28760-201ENSMUST00000185995 736 ntBASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms