Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Gm12485-201ENSMUST00000119641 291 ntBASIC13.84□□□□□ -0.19
Usp11Q99K46 Gm14928-201ENSMUST00000120198 477 ntBASIC13.84□□□□□ -0.19
Usp11Q99K46 Gm15376-201ENSMUST00000122258 783 ntBASIC13.84□□□□□ -0.19
Usp11Q99K46 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.84□□□□□ -0.19
Usp11Q99K46 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp11Q99K46 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp11Q99K46 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Usp11Q99K46 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp11Q99K46 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.83□□□□□ -0.19
Usp11Q99K46 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.83□□□□□ -0.19
Usp11Q99K46 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp11Q99K46 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp11Q99K46 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.83□□□□□ -0.19
Usp11Q99K46 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp11Q99K46 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Usp11Q99K46 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Usp11Q99K46 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp11Q99K46 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Mir7654-201ENSMUST00000185082 70 ntBASIC13.83□□□□□ -0.2
Usp11Q99K46 Gm8515-201ENSMUST00000194852 576 ntBASIC13.83□□□□□ -0.2
Usp11Q99K46 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp11Q99K46 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp11Q99K46 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.83□□□□□ -0.2
Usp11Q99K46 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp11Q99K46 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp11Q99K46 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.83□□□□□ -0.2
Usp11Q99K46 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Usp11Q99K46 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp11Q99K46 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp11Q99K46 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp11Q99K46 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp11Q99K46 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.82□□□□□ -0.2
Usp11Q99K46 Gm15770-201ENSMUST00000117498 584 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp11Q99K46 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Gm18307-201ENSMUST00000206864 949 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp11Q99K46 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Gm6180-201ENSMUST00000065243 498 ntBASIC13.82□□□□□ -0.2
Usp11Q99K46 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp11Q99K46 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms