Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Gm11524-201ENSMUST00000119349 807 ntBASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Gm20949-201ENSMUST00000206478 952 ntBASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb4Q91XZ6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm22189-201ENSMUST00000103822 86 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Mir874-201ENSMUST00000104769 76 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm26464-201ENSMUST00000157094 305 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm42612-201ENSMUST00000197986 623 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm43170-201ENSMUST00000199827 612 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.06□□□□□ -0.32
Pcdhb4Q91XZ6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gm15376-201ENSMUST00000122258 783 ntBASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms