Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm13689-201ENSMUST00000119360 685 ntBASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm8602-201ENSMUST00000184045 607 ntBASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm5035-201ENSMUST00000215581 927 ntBASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga4Q91XY4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gm17150-201ENSMUST00000165577 381 ntBASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gm38671-201ENSMUST00000200573 130 ntBASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga4Q91XY4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms