Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh18Q8VHR0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Mir698-201ENSMUST00000102164 109 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Gm46209-201ENSMUST00000217912 553 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Pcdh18Q8VHR0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Gm25948-201ENSMUST00000175334 112 ntBASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Mir497b-201ENSMUST00000093601 125 ntBASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh18Q8VHR0 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms