Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm6912-201ENSMUST00000117218 544 ntBASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm14822-201ENSMUST00000122247 291 ntBASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm27702-201ENSMUST00000184512 56 ntBASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpa1Q8VEE4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Gm18889-201ENSMUST00000174284 929 ntBASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpa1Q8VEE4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms