Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39aQ8VDW0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm13350-201ENSMUST00000120519 479 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm13342-201ENSMUST00000121055 207 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm7584-201ENSMUST00000175829 940 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm37042-201ENSMUST00000193816 581 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm38158-201ENSMUST00000194617 339 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm44364-201ENSMUST00000198368 141 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Cts7-204ENSMUST00000225321 1257 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39aQ8VDW0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Gm15370-201ENSMUST00000117158 253 ntBASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Gm12241-201ENSMUST00000118330 726 ntBASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx39aQ8VDW0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gm7783-201ENSMUST00000204795 781 ntBASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Gm9257-201ENSMUST00000221254 232 ntBASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx39aQ8VDW0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms