Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.46□□□□□ -0.09
Trim9Q8C7M3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim9Q8C7M3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim9Q8C7M3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm11618-201ENSMUST00000117946 267 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm8213-201ENSMUST00000118191 441 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm12490-201ENSMUST00000120255 560 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm28693-202ENSMUST00000190758 331 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Gm6458-201ENSMUST00000211573 635 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trim9Q8C7M3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim9Q8C7M3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms