Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm29001-201ENSMUST00000186177 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm28292-201ENSMUST00000186593 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm28101-201ENSMUST00000187608 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm29076-201ENSMUST00000187689 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm28302-201ENSMUST00000187931 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm28646-201ENSMUST00000188220 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm28205-201ENSMUST00000189177 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm29032-201ENSMUST00000189797 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm28695-201ENSMUST00000190300 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm37448-201ENSMUST00000192795 697 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cfap54Q8C6S9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cfap54Q8C6S9 Gm23949-201ENSMUST00000104027 127 ntBASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm12899-201ENSMUST00000120565 551 ntBASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm13736-201ENSMUST00000119272 253 ntBASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Gm14460-201ENSMUST00000121511 639 ntBASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cfap54Q8C6S9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms