Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC18.43■□□□□ 0.54
Usp47Q8BY87 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Mir339-201ENSMUST00000083659 96 ntBASIC18.43■□□□□ 0.54
Usp47Q8BY87 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp47Q8BY87 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm14723-201ENSMUST00000118686 215 ntBASIC18.42■□□□□ 0.54
Usp47Q8BY87 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm42627-201ENSMUST00000197347 224 ntBASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm7046-201ENSMUST00000221351 977 ntBASIC18.42■□□□□ 0.54
Usp47Q8BY87 Cts7-204ENSMUST00000225321 1257 ntBASIC18.42■□□□□ 0.54
Usp47Q8BY87 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm8227-201ENSMUST00000223306 571 ntBASIC18.42■□□□□ 0.54
Usp47Q8BY87 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Usp47Q8BY87 Gm5385-201ENSMUST00000118988 1559 ntBASIC18.41■□□□□ 0.54
Usp47Q8BY87 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Gm18916-201ENSMUST00000198264 1246 ntBASIC18.41■□□□□ 0.54
Usp47Q8BY87 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.41■□□□□ 0.54
Usp47Q8BY87 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC18.41■□□□□ 0.54
Usp47Q8BY87 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.41■□□□□ 0.54
Usp47Q8BY87 AC132317.1-201ENSMUST00000227227 962 ntBASIC18.41■□□□□ 0.54
Usp47Q8BY87 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp47Q8BY87 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp47Q8BY87 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms