Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 AC122314.1-201ENSMUST00000223056 2239 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm6506-201ENSMUST00000119775 1136 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Rmrp-201ENSMUST00000157463 271 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm27627-201ENSMUST00000183644 150 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm27530-201ENSMUST00000184096 98 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 D9Wsu149-201ENSMUST00000214169 594 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 AL732506.1-201ENSMUST00000226420 281 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Gm11450-201ENSMUST00000121144 333 ntBASIC18.29■□□□□ 0.52
Usp54Q8BL06 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 AC125486.1-201ENSMUST00000218701 320 ntBASIC18.29■□□□□ 0.52
Usp54Q8BL06 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Mir219a-1-201ENSMUST00000083621 110 ntBASIC18.29■□□□□ 0.52
Usp54Q8BL06 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Usp54Q8BL06 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm15711-201ENSMUST00000118889 535 ntBASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm12208-201ENSMUST00000122004 163 ntBASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 AC107638.1-201ENSMUST00000213690 1061 ntBASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm9996-201ENSMUST00000070359 913 ntBASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC18.28■□□□□ 0.52
Usp54Q8BL06 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp54Q8BL06 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp54Q8BL06 Gm13035-201ENSMUST00000117496 342 ntBASIC18.27■□□□□ 0.52
Usp54Q8BL06 Gm11667-201ENSMUST00000119828 486 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms