Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Gm12485-201ENSMUST00000119641 291 ntBASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2bQ8BJF9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2bQ8BJF9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2bQ8BJF9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm29608-201ENSMUST00000190444 463 ntBASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm5161-201ENSMUST00000075243 853 ntBASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm24447-201ENSMUST00000083977 338 ntBASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2bQ8BJF9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms