Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc5a7Q8BGY9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Gm9727-201ENSMUST00000161387 555 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Mir8117-201ENSMUST00000184773 107 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc5a7Q8BGY9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Slc5a7Q8BGY9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.45□□□□□ -0.58
Slc5a7Q8BGY9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Slc5a7Q8BGY9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Slc5a7Q8BGY9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Slc5a7Q8BGY9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Slc5a7Q8BGY9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms