Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Gm16379-201ENSMUST00000161469 348 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Gm8762-201ENSMUST00000193486 339 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh19Q80TF3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm7029-201ENSMUST00000173226 450 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm7399-201ENSMUST00000032395 858 ntBASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms