Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx55Q6ZPL9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm37201-201ENSMUST00000191845 523 ntBASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm44651-201ENSMUST00000207343 372 ntBASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm8913-201ENSMUST00000209491 641 ntBASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx55Q6ZPL9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm20426-201ENSMUST00000173657 440 ntBASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx55Q6ZPL9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx55Q6ZPL9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx55Q6ZPL9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx55Q6ZPL9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx55Q6ZPL9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx55Q6ZPL9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Gm12291-201ENSMUST00000121627 311 ntBASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms