Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup98Q6PFD9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup98Q6PFD9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup98Q6PFD9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup98Q6PFD9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nup98Q6PFD9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Nup98Q6PFD9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup98Q6PFD9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Gzmn-202ENSMUST00000225535 989 ntBASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup98Q6PFD9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm12380-201ENSMUST00000119012 544 ntBASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm16570-201ENSMUST00000161951 436 ntBASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nup98Q6PFD9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm23119-201ENSMUST00000158610 140 ntBASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm18734-201ENSMUST00000172937 808 ntBASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Mir5120-201ENSMUST00000175020 78 ntBASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.18■□□□□ 0.02
Nup98Q6PFD9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms