Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Gm11918-201ENSMUST00000121660 179 ntBASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Gm6983-201ENSMUST00000214912 628 ntBASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Gm26315-201ENSMUST00000083890 321 ntBASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ParpbpQ6IRT3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ParpbpQ6IRT3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ParpbpQ6IRT3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Gm12490-201ENSMUST00000120255 560 ntBASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Gm12138-201ENSMUST00000122180 951 ntBASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ParpbpQ6IRT3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms