Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.92□□□□□ -0.34
VclQ64727 Gm37922-201ENSMUST00000195596 455 ntBASIC12.92□□□□□ -0.34
VclQ64727 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.92□□□□□ -0.34
VclQ64727 Gm44069-201ENSMUST00000204898 506 ntBASIC12.92□□□□□ -0.34
VclQ64727 Gm45841-201ENSMUST00000207700 164 ntBASIC12.92□□□□□ -0.34
VclQ64727 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.92□□□□□ -0.34
VclQ64727 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
VclQ64727 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.91□□□□□ -0.34
VclQ64727 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.91□□□□□ -0.34
VclQ64727 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.91□□□□□ -0.34
VclQ64727 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.91□□□□□ -0.34
VclQ64727 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.91□□□□□ -0.34
VclQ64727 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.91□□□□□ -0.34
VclQ64727 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gm25857-201ENSMUST00000082788 129 ntBASIC12.91□□□□□ -0.34
VclQ64727 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VclQ64727 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.91□□□□□ -0.34
VclQ64727 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VclQ64727 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.91□□□□□ -0.34
VclQ64727 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.9□□□□□ -0.34
VclQ64727 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.9□□□□□ -0.34
VclQ64727 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
VclQ64727 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.9□□□□□ -0.34
VclQ64727 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.9□□□□□ -0.34
VclQ64727 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.9□□□□□ -0.34
VclQ64727 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.9□□□□□ -0.34
VclQ64727 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VclQ64727 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VclQ64727 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms