Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.7□□□□□ -0.86
Ss18Q62280 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ss18Q62280 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.69□□□□□ -0.86
Ss18Q62280 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Ss18Q62280 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.69□□□□□ -0.86
Ss18Q62280 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.69□□□□□ -0.86
Ss18Q62280 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.69□□□□□ -0.86
Ss18Q62280 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Syt7-205ENSMUST00000224135 1557 ntBASIC9.69□□□□□ -0.86
Ss18Q62280 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.69□□□□□ -0.86
Ss18Q62280 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.69□□□□□ -0.86
Ss18Q62280 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.69□□□□□ -0.86
Ss18Q62280 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ss18Q62280 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ss18Q62280 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ss18Q62280 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ss18Q62280 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.68□□□□□ -0.86
Ss18Q62280 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.68□□□□□ -0.86
Ss18Q62280 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Ss18Q62280 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.68□□□□□ -0.86
Ss18Q62280 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Ss18Q62280 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Gm27321-201ENSMUST00000185021 205 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Gm43703-201ENSMUST00000200523 763 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.68□□□□□ -0.86
Ss18Q62280 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.68□□□□□ -0.86
Ss18Q62280 Gm17795-201ENSMUST00000214505 757 ntBASIC9.68□□□□□ -0.86
Ss18Q62280 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ss18Q62280 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Ss18Q62280 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.68□□□□□ -0.86
Ss18Q62280 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.68□□□□□ -0.86
Ss18Q62280 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms