Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.81□□□□□ -0.36
Vsx2Q61412 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.81□□□□□ -0.36
Vsx2Q61412 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vsx2Q61412 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx2Q61412 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx2Q61412 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vsx2Q61412 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm27892-201ENSMUST00000185017 106 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm38144-201ENSMUST00000192790 465 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Gm44397-201ENSMUST00000195950 113 ntBASIC12.8□□□□□ -0.36
Vsx2Q61412 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx2Q61412 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vsx2Q61412 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.8□□□□□ -0.36
Vsx2Q61412 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx2Q61412 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.79□□□□□ -0.36
Vsx2Q61412 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.79□□□□□ -0.36
Vsx2Q61412 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.79□□□□□ -0.36
Vsx2Q61412 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.79□□□□□ -0.36
Vsx2Q61412 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Gm8463-201ENSMUST00000208573 613 ntBASIC12.79□□□□□ -0.36
Vsx2Q61412 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms