Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.23□□□□□ -0.29
Six4Q61321 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Six4Q61321 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Gm16479-201ENSMUST00000121706 932 ntBASIC13.23□□□□□ -0.29
Six4Q61321 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Six4Q61321 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.23□□□□□ -0.29
Six4Q61321 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.23□□□□□ -0.29
Six4Q61321 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Six4Q61321 Gm16177-201ENSMUST00000120728 718 ntBASIC13.22□□□□□ -0.29
Six4Q61321 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Gm7029-201ENSMUST00000173226 450 ntBASIC13.22□□□□□ -0.29
Six4Q61321 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Gm18187-201ENSMUST00000196476 984 ntBASIC13.22□□□□□ -0.29
Six4Q61321 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Six4Q61321 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.22□□□□□ -0.29
Six4Q61321 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Six4Q61321 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.22□□□□□ -0.29
Six4Q61321 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Six4Q61321 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.21□□□□□ -0.29
Six4Q61321 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.21□□□□□ -0.29
Six4Q61321 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.21□□□□□ -0.29
Six4Q61321 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.21□□□□□ -0.29
Six4Q61321 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.21□□□□□ -0.29
Six4Q61321 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Six4Q61321 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Six4Q61321 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Six4Q61321 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.21□□□□□ -0.29
Six4Q61321 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.21□□□□□ -0.29
Six4Q61321 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.21□□□□□ -0.29
Six4Q61321 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Six4Q61321 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.21□□□□□ -0.29
Six4Q61321 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Six4Q61321 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms