Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Mir686-201ENSMUST00000102174 109 ntBASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm14723-201ENSMUST00000118686 215 ntBASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm27501-201ENSMUST00000183599 107 ntBASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.97□□□□□ -0.17
Shroom1Q5SX79 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gm16202-201ENSMUST00000117532 544 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gm11793-201ENSMUST00000120433 981 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gm11637-201ENSMUST00000120601 592 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Mir8109-201ENSMUST00000184375 117 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gm38266-201ENSMUST00000194931 421 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shroom1Q5SX79 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shroom1Q5SX79 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shroom1Q5SX79 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shroom1Q5SX79 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shroom1Q5SX79 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shroom1Q5SX79 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.96□□□□□ -0.18
Shroom1Q5SX79 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Gm25261-201ENSMUST00000157416 134 ntBASIC13.95□□□□□ -0.18
Shroom1Q5SX79 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms