Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Gm45384-201ENSMUST00000210451 277 ntBASIC13.95□□□□□ -0.18
Syne3Q4FZC9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm12403-201ENSMUST00000121384 959 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm44397-201ENSMUST00000195950 113 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne3Q4FZC9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne3Q4FZC9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms