Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.3□□□□□ -0.28
Cnga4Q3UW12 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Gm25948-201ENSMUST00000175334 112 ntBASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Shd-206ENSMUST00000225145 998 ntBASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.3□□□□□ -0.28
Cnga4Q3UW12 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cnga4Q3UW12 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm15467-201ENSMUST00000120582 445 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm27772-201ENSMUST00000184900 187 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.29□□□□□ -0.28
Cnga4Q3UW12 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms